Major Depressive Disorder Clinical Trial
Major depressive disorder (MDD) affects around 7% of the population yearly. Although
effective treatments are available, only around half of all patients participating in
clinical trials respond to 6 to 12 weeks of antidepressant treatment. Given these high
failure rates, the ability to predict as early as possible whether a patient is (un)likely
to respond would be of great value, as it would enable physicians to change treatment
strategies faster.
Early improvement has consistently been found to be a strong predictor of later response.
However, misclassification is still quite common, with perhaps a third of those who do not
show early improvement going on to respond. Conversely, a substantial proportion of those
who do show early improvement do not go on to respond. One possibility for improving the
predictive power of early improvement is to examine individual symptoms, rather than the
total score on a depression rating scale. Some items, for example, could reflect
antidepressant side effects (e.g. gastrointestinal symptoms) and may not be very predictive.
The proposed project aims to examine the relationship between early improvement in
individual symptoms and response to antidepressants in a very large patient sample. This
large sample size makes it possible to use more rigorous methods than previous studies, such
as the use of cross-validation to confirm the findings. It also makes it possible to examine
a large set of predictors, including possible interactions among early-improving symptoms
and between symptoms and demographic factors like age and gender. The added value of
individual symptoms over and above using the total symptom score alone will also be
examined, as well as possible differences between different antidepressant classes.
The project will use penalized (lasso) regression, which is well-suited to analyzing data
with a large number of (potentially highly correlated) predictors. In the primary analysis,
response after 6 weeks of treatment will be predicted. In secondary analyses, remission at
week 6 and response and remission at week 12 will also be predicted.
Study design
The proposed project is an individual patient data meta-analysis. Data will be collated from
31 trials of second-generation antidepressants for the treatment of major depressive
disorder, using data from trial arms treated with placebo or Food and Drug Administration
(FDA)-approved antidepressants. These trials include a total of approximately 7,800
antidepressant-treated and 3,000 placebo-treated participants. Penalized regression methods
(specifically least absolute shrinkage and selection operator, 'lasso') will be used to
examine the relationship between early improvement in specific depressive symptoms and
response to treatment. Furthermore, the investigators will examine whether interactions
among early-improving symptoms and between early-improving symptoms and demographic
variables such as age and gender improve the prediction of treatment outcome. Finally, the
investigators will also examine whether the prediction of response to treatment by early
improvement in specific symptoms is dependent upon the type of treatment provided (placebo,
selective serotonin reuptake inhibitors [SSRIs] or serotonin-norepinephrine reuptake
inhibitors [SNRIs]), which would suggest a drug-specific mechanism.
Statistical Analysis Plan
Missing data: A complete cases approach will be taken, as it is of interest to predict
response and remission in participants who have actually taken an antidepressant for the
specified period of time. Therefore, only participants who have valid baseline, week 2 and
week 6 (±1) HDRS scores will be selected for the main analyses (or valid week 12 data for
the secondary analyses of week 12 outcomes).
Training and validation sample: The data will be randomly divided into an 80% training
sample and a 20% validation sample (stratified by treatment group). Model discovery will be
done in the training sample, while the predictive performance of the models will be assessed
in the validation sample.
Predictors: Improvement in individual symptoms will be derived from the HDRS items at
baseline and week 2. The answer choices for these items range from 0 - 2 for 7 items and 0 -
4 for 10 items. Early improvement will be dichotomized into "no improvement" and
"improvement". "No improvement" is indicated by worsening of the item score (e.g. from 1 at
baseline to 2 at week 2) or no change in the item score. "Improvement" is indicated by an
improvement in the item score of ≥1. Cross-tables will be used to check whether any
variables are very highly correlated and if so, one of the items will be removed. Baseline
scores on the HDRS items will also be included in the model in order to investigate the
added value of improvement of individual items over and above the baseline item scores.
For the total HDRS-17 score, early improvement will also be dichotomized into no/minor
improvement (<20% improvement) or improvement (≥20% improvement). The baseline HDRS-17 score
will be standardized and included in the model as a covariate.
With regard to the demographic factors, gender is already a dichotomous variable and age
will be standardized.
Lasso regression: Lasso regression will be applied to the following models:
Primary analysis (in the antidepressant-treated group only)
1. A model containing variables for early improvement at week 2 in all 17 HDRS items, age,
gender, and all two-way interactions between these variables; baseline HDRS item
scores; and additionally total HDRS score at baseline and early improvement (≥20%
improvement in score) in total HDRS score at week 2.
Exploratory analysis (in all participants, including those treated with placebo)
2. As model 1 above, but including treatment group (placebo, SSRI, SNRI) and all two- and
three-way interactions with treatment group.
The tuning parameter (lambda) resulting in minimal prediction error (based on deviance) will
be selected with the help of 10-fold cross-validation. The GLMMLasso package for multilevel
data will be used to fit the lasso model, which will subsequently be refit with
mixed-effects logistic regression using only the variables selected by lasso regression.
Model performance: Prediction accuracy will be assessed by applying the mixed-effects
logistic regression model to the independent validation sample. The area under the curve
(AUC) for the receiver-operating characteristic (ROC) curve in predicting response/remission
at 6 or 12 weeks will be used to assess prediction accuracy. Sensitivity, specificity, and
accuracy (percentage of correct predictions) will also be determined.
Secondary analyses: Secondary analyses will examine 12-week outcomes within the subgroup of
trials with a double-blind treatment duration of at least 12 weeks.
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