Prostate Cancer Clinical Trial
Official title:
Intraoperational Prostate Loge Biopsies (iPROLOGX) After Radical Prostatovesiculectomy (RPVE) in Prostate Cancer (PCA) Patients for Molecular Tumor Marker Analysis
This project is about the detection of occult tumor cells in surgical margins of radical
prostatovesiculectomy by analysing the methylation status of Glutathione S-transferase P 1
(GSTP1). After gland excision specimens are obtained from 9 defined areas of the prostatic
fossa. The biopsies are divided into two parts. One part used for histopathological analysis
and the other part for moleculargenetic analysis. Results will be correlated e.g. with tumor
stage, Gleason Score and prostate specific antigen (PSA).
The prostate-cancer-negative control group with bladder cancer.
This project is about the detection of occult tumor cells in surgical margins of radical
prostatovesiculectomy by analysing the methylation status of Glutathione S-transferase P 1
(GSTP1). After gland excision specimens are obtained from 9 defined areas of the prostatic
fossa. The biopsies are divided into two parts. One part used for histopathological analysis
and the other part for moleculargenetic analysis. Results will be correlated e.g. with tumor
stage, Gleason Score and prostate specific antigen (PSA).
The prostate-cancer-negative control group with bladder cancer.
DNA ISOLATION
DNA from biopsies stored by -80°C was isolated by using innuPREP DNA mini Kit (Analytik
Jena, Jena, Germany) following protocol 1 of the manufacturer's instructions. DNA was eluted
with 50 µl elution buffer. Concentration and purity were analysed by using Nanodrop 2000.
DNA BISULFITE MODIFICATION
DNA was modified by using EpiTect Bisulfite Kit (QIAGEN, Hilden, Germany) according to
manufacturer's instructions. Samples were eluted once with 20 µl elution buffer.
QUANTITATIVE METHYLATION SPECIFIC PCR
Methylation status of GSTP1 is analysed by quantitative methylation-specific PCR (Q-MSP)
using StepOnePlus Real-Time PCR System and StepOne Software v2.1 from Applied Biosystems
(Darmstadt, Germany). Q-MSP was performed in duplicate analysing genes Actin and GSTP1. The
primers' and testing probes' sequences used to amplify and detect hypermethylated GSTP1
were: 5'-AgTTgCgCggCgATTTC (forward primer), 5'-gCCCCAATACTAAATCACgACg (reverse primer) and
5'-CggTCgACgTTCggggTgTAgCg (taqman probe), labelled with fluorescence dye FAM. The primers'
and testing probes' sequences used to amplify and detect Actin were:
5'-TggTgATggAggAggTTTAgTAAgT (forward primer), 5'-AACCAATAAAACCTACTCCTCCCTTAA (reverse
primer),5'-ACCACCACCCAACACACAATAACAAACACA (taqman probe), labelled with fluorescence dye
VIC.
The Q-MSP was carried out at 50°C for 2 min., 95°C for 15 min. followed by 50 cycles of 95°C
for 1s and 60°C for 1 min. As a positive control bisulfite-converted DNA of DU145 and LNCap
were used. Blank reactions with destillated water, which replaced DNA, served as negative
control (NTC).
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Allocation: Non-Randomized, Intervention Model: Parallel Assignment, Masking: Open Label, Primary Purpose: Basic Science
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