Clinical Trial Details
— Status: Completed
Administrative data
NCT number |
NCT04128839 |
Other study ID # |
USDA-NIFA 2017-67018-26367 |
Secondary ID |
|
Status |
Completed |
Phase |
N/A
|
First received |
|
Last updated |
|
Start date |
April 27, 2019 |
Est. completion date |
December 27, 2021 |
Study information
Verified date |
January 2024 |
Source |
Montana State University |
Contact |
n/a |
Is FDA regulated |
No |
Health authority |
|
Study type |
Interventional
|
Clinical Trial Summary
The overall goal of this project is to determine the inflammation lowering impact of
anthocyanin-rich Aronia berries. Inflammation is an underlying mechanism driving the
development of several diseases. While an elevation in immune signals in the systemic
circulation is commonly attributed to adipose tissue, inflammation is not present in all
obese individuals. Adipose tissue must become inflamed, and the inflammation trigger may come
from other sources. Microorganisms (microbiome), host tissues, and immune cells residing in
the gastrointestinal tract (GIT) are a key source of pro-inflammatory signals that may cause
the host organism to become inflamed. Anthocyanins are bioactive compounds with established
anti-inflammatory and microbiome altering properties. We hypothesize that the GIT microbiome
is a key determinant of host inflammation than can be manipulated by anthocyanins-rich
berries to lower inflammation. We assembled a cohort of individuals, characterized their GIT
microbiome and performed anthropometric measurements, basal measures of metabolism and
metabolic health, and triglyceridemic, metabolomic, and inflammation responses to a high-fat
meal challenge.
Description:
Anthropometrics. Measurements were collected from participants using the validated segmental
multifrequency bioelectrical impedance analysis (SECA mBCA 515, Hamburg, Germany). Fat mass
(%) and estimated visceral adipose (L) were used for analysis.
High-Fat Meal Challenge. The high-fat meal contained salted butter (58.3 g, Tillamook) over 3
pieces of whole wheat toast (127.5 g; Wheat Montana). Total energy content of the meal was
714 kcal, with 43.1% from fat, with a macronutrient breakdown of 50 g fat, 54 g carbohydrate,
and 12 g protein. Water was provided with the meal; caffeinated black tea was provided
instead for participants who identified as habitual coffee consumers.
Blood Sampling. Participants were instructed to avoid alcohol consumption and strenuous
physical activity in the 24 hours before their visit and to complete an overnight fast (10 -
12 hours) before blood collection. Participant blood samples were collected by a certified
nurse or physician in the morning before ingestion of the meal and hourly for 4 hours after
meal ingestion, totaling five time points. Whole blood in serum separating tubes was allowed
to clot for 15 minutes before centrifugation at 1200 RPM for 15 minutes with resulting serum
aliquoted and stored at -80ºC until analysis.
Determination of blood markers. Blood markers of metabolic syndrome were determined from
whole blood run on Picollo Xpress Chemistry Analyzer lipid panels (Abaxis, Union City, USA).
Serum insulin (INS) was determined using an insulin ELISA kit (MP Biomedicals, Solon, OH)
performed according to manufacturer instructions. Cytokine measurement was performed using
high-sensitivity multiplexing technology (Bio-Rad Bio-Plex 200 HTS) following procedures by
Millipore (EMD Millipore Corporation, Billerica, USA). Classic systemic pro-inflammatory
cytokines were measured and include granulocyte macrophage colony stimulating factor
(GM-CSF), interleukin (IL)-1B, IL-6, tumor necrosis factor (TNF)-α. InterleukinI-17 and
IL-23, both of which serve a pro-inflammatory and regulatory role in the gut mucosa, were
also measured. Serum samples at each time point during the high-fat meal challenge were run
in duplicate.
Stool Sample Collection. Collection kits were provided and participants were asked to follow
included instructions for the self-collection of a stool sample in the 24 hours before their
blood collection visit. After initial collection into a sterile disposable commode, a small
portion of the sample was transferred into a sterile Eppendorf tube and transported to
researchers. Samples were prepared and aliquoted in an anaerobic chamber then frozen at -80ºC
until analysis.
Genomic DNA Extraction and Microbial Analysis. Extraction of bulk DNA from fecal samples was
performed using Powersoil DNA Isolation Kit (Mo Bio Laboratories, Inc.) and bead beating. DNA
was shipped overnight to the University of Michigan, Michigan Microbiome Project for Illumina
MiSeq amplicon sequencing of the 16S rRNA V4 region. After DNA quantification, V4 amplicon
libraries were generated with dual-index barcoded primers, then by library purification,
pooling, and MiSeq paired-end sequencing. Raw sequencing reads were processed and curated
using MOTHUR software (Version 1.35.1) following the MOTHUR standard operating procedure for
the MiSeq platform39. In brief review, paired-end reads were assembled into contiguous
sequences and screened for length and quality. The remaining contigs were aligned to the
SILVA ribosomal RNA database (Release 132), a comprehensive collection of aligned rRNA
sequences. Potentially chimeric sequences were identified and removed using the UCHIME
algorithm in MOTHUR. Taxonomic classifications were assigned using the Bayesian classifier of
the Ribosomal Database Project. Non-target reads were removed, and operational taxonomic
units (OTUs) were assigned using VSEARCH distance-based clustering at the 97% similarity
threshold. Alpha-, and β- diversity indices were generated using the vegan package in R40. An
OTU-based data matrix was constructed for participants included in the ppTG phenotype.
Metabolomic Analysis. Frozen serum samples were thawed and 20μL was placed in a clean tube.
80μL of HPLC grade methanol was added to the sample after which it was vortexed briefly and
placed in a -80 C freezer for 2 hours. After two hours, the sample was centrifuged at 20,000g
for 10 minutes. The metabolite supernatant was collected and concentrated in a Speed Vac to
dryness while the protein pellet was discarded. Samples were then stored at -80 C until ready
for LCMS analysis at which time they were reconstituted with 40μL of methanol:water (50:50)
and placed in a clean mass spectrometry vial. Analysis was completed on an Agilent 6538 Q-TOF
MS coupled to an Agilent 1290 UHPLC using a 130A, 1.7μm, 2.1mm X 10mm Acquity BEH-HILIC HPLC
column. Samples were ionized via electrospray ionization and runs were completed in positive
mode. Mobile phase A was 15mmol/L ammonium formate and mobile phase B was ACN using a 10-40%
A gradient over 6 minutes. Flow was kept at 400µL/minute and the column compartment
temperature was set at 30 C. MSMS analysis was completed using the same LC conditions while
targeting specific ions using retention time and m/z values from previous MS runs. After LCMS
analysis completion, raw data files were converted to .xml files using MSConvert. Data was
then mined with mzMine using an intensity minimum value of 1,000 based on a visual inspection
of the total ion chromatogram to remove noise. Blank samples were also ran and the resulting
features were removed from the biological data if present at a ratio under 5:1 in the sample
compared to the blank. Mined data was then input into MetaboAnalyst for statistical analysis.
Tandem MS data was analyzed with Sirius software to identify features.