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Genetic Predisposition clinical trials

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NCT ID: NCT04873427 Terminated - Prostate Cancer Clinical Trials

In Situ Clonal Heterogeneity in Prostatic Diagnostic Biopsies

Start date: April 15, 2021
Phase:
Study type: Observational

This is a retrospective, proof of concept study, which aims at reconstructing the cellular heterogeneity of the tumor in multi-needle diagnostic prostate biopsy as well as any biopsy containing potentially pre-malignant tissue, to study its implications in the clinical history of the disease. For each patient, 2 or more samples will be prepared starting from the FFPE diagnostic material. The biopsy used for assigning the Gleason score will be sequenced, together with two or more of the local peri-proximal biopsies with a higher level of differentiation. Samples will undergo Whole Exome Sequencing with an average coverage of 300x at the Wellcome Sanger Institute (WSI, Hinxton, UK). Sequencing data will be analysed for single nucleotide variants, copy number variants and structural variants by using state-of-the-art data analysis pipeline at WSI. 1. Reconstruction of local PCa heterogeneity in multi-needle diagnostic biopsy with different Gleason scores (6-10) using high-coverage whole exome sequencing (WES) and DP-based clonal analysis; 2. Characterization of the relationships between pathological differentiation (Gleason score) and genomics-measured heterogeneity and malignancy features; 3. Assessment of clinical implications of clonal heterogeneity. The study will include an average of 150 prostatic diagnostic biopsies from a cohort of 20 early metastatic PC patients and 20 non-relapsing/non-metastatic patients with indolent malignant disease.

NCT ID: NCT04119596 Terminated - Parkinson Disease Clinical Trials

Study of the Genome, Gut Metagenome and Diet of Patients With Incident Parkinson's Disease

Start date: September 1, 2020
Phase:
Study type: Observational

A case-control study to identify microbiome and genetic differences between healthy subjects and patients with incident Parkinson's disease.

NCT ID: NCT03291743 Terminated - Crohn Disease Clinical Trials

The Biologic Onset of Crohn's Disease: A Screening Study in First Degree Relatives

Start date: February 10, 2017
Phase: N/A
Study type: Interventional

Pursuing very early diagnosis is standard of care for several diseases including colon cancer, diabetes and liver disease where an early and aggressive diagnostic and therapeutic approach has been shown to change their natural history. Crohn's disease [CD] still lags since commonly at presentation CD has already run a long course, often responding poorly to therapy or requiring surgery. This innovative project proposes a minimally invasive strategy - capsule endoscopy-based screening of first degree relatives [FDR's] of CD patients - to develop tools to diagnose CD at or near its biologic onset.