Clinical Trial Details
— Status: Recruiting
Administrative data
NCT number |
NCT06032117 |
Other study ID # |
1891300 |
Secondary ID |
|
Status |
Recruiting |
Phase |
|
First received |
|
Last updated |
|
Start date |
April 11, 2024 |
Est. completion date |
June 30, 2024 |
Study information
Verified date |
April 2024 |
Source |
University of Nevada, Reno |
Contact |
Joshua Garn, PhD |
Phone |
(775) 682-6996 |
Email |
jgarn[@]unr.edu |
Is FDA regulated |
No |
Health authority |
|
Study type |
Observational
|
Clinical Trial Summary
The investigators will characterize and compare protein signatures between groups with and
without post-infection irritable bowel syndrome (PI-IBS). From previous Healthy Nevada
Project (HNP) participants, at least 60 patients with PI-IBS and 60 healthy controls will
undergo additional proteomics testing, age, sex and race/ethnicity-matched healthy. The
investigators will use proteomic testing to detect, quantify and characterize serum protein
biomarkers and protein signatures, and compare biomarkers and signatures between the patient
groups of interest. Serum samples will be analyzed by the Nevada Proteomics Center. Samples
will first undergo protein digestion, then peptides are separated using liquid chromatography
(LC), mass spectral analysis is performed using an Orbitrap Eclipse mass spectrometer (Thermo
Scientific, San Jose, CA) using data-independent acquisition (DIA). Library generation and
data analysis will be performed using Spectronaut software (Biognosys, Schlieren,
Switzerland). The Nevada Proteomics Center and Bioinformatics Center will be engaged during
the data analyses comparing biomarkers and signatures between the patient groups of interest.
This research aim has the potential to add to our understanding of the underlying mechanisms
of PI-IBS and to create reliable differentiating protein biomarkers to better diagnose
PI-IBS.
Description:
The investigators will characterize and compare protein signatures between groups with and
without PI-IBS. From previous HNP participants, at least 60 patients with PI-IBS and 60
healthy controls will be recruited to undergo additional proteomics testing, age, sex and
race/ethnicity-matched healthy. The investigators will use proteomic testing to detect,
quantify and characterize serum protein biomarkers and protein signatures, and compare
biomarkers and signatures between the patient groups of interest. Serum samples will be
analyzed by the Nevada Proteomics Center. Samples will first undergo protein digestion, then
peptides are separated using liquid chromatography (LC), mass spectral analysis is performed
using an Orbitrap Eclipse mass spectrometer (Thermo Scientific, San Jose, CA) using
data-independent acquisition (DIA). Library generation and data analysis will be performed
using Spectronaut software (Biognosys, Schlieren, Switzerland). The Nevada Proteomics Center
and Bioinformatics Center will be engaged during the data analyses comparing biomarkers and
signatures between the patient groups of interest. This research aim has the potential to add
to our understanding of the underlying mechanisms of PI-IBS and to create reliable
differentiating protein biomarkers to better diagnose PI-IBS.