Pneumonia, Ventilator-Associated Clinical Trial
Official title:
Culture Versus Genomics: Study of Oropharyngeal and Tracheal Flora in Intubated Patients. Can we Better Understand the Development of Ventilator-Acquired Pneumonia (VAP) and Predict Its Causing Pathogen(s)?
Pathogens of ventilator-associated pneumonia (VAP) come from colonizers of the trachea. The
hypothesis of the investigators is that during the first days of intubation, independently
of the use of antibiotics, there is a change in the oro-pharyngeal flora leading to the
selection of one pathogen in the trachea, that will finally be the cause of VAP.
The investigators designed a prospective study including 300 patients intubated for more
than 3 days, with daily analysis of oro-pharyngeal juice and tracheal aspirate by culture
and metagenomics, in order to determine if this microbiological surveillance permits:
1. To predict a high risk to develop a VAP in the next 48h and even to predict its agent
2. To better understand the development of VAP by studying the evolution of the
"respiratory flora" in the context of intubation
BACKGROUND OF THE STUDY:
The ventilator-associated pneumonia (VAP) is responsible for almost half of infections
acquired in intensive care, affecting up to 28% of mechanically ventilated patients with a
mortality rate ranging from 25 to 50%. The majority of these VAP originate in the
sub-glottic juice that accumulates just above the endotracheal tube cuff. Many preventive
measures exist and are applied in this institution, including oropharyngeal aspiration every
4 hours and tracheal aspirates every 8 hours. Currently, these aspirates are simply
discarded. However, a French study evaluating the colonization and infection of the
respiratory tract of patients with acute respiratory distress syndrome (ARDS) has
highlighted that the causative agent of VAP is selected in more than 2/3 of the cases in
tracheal aspirates several days before the VAP. This suggest that "microbiological
surveillance" of daily aspirates may permit the identification of a selected respiratory
pathogen later responsible of VAP.
Parallel to this, the rapid development of genomics has highlighted the role of flora
(microbiota) and its link with disease (eg, colitis and intestinal microbiota inflammatory).
This area is also emerging in the field of respiratory tract infections, for example in
patients with chronic obstructive pulmonary disease (COPD) or asthma. There is no
description yet of metagenomics changes in respiratory flora of patients intubated with or
without VAP, neither evaluation of the benefits of such an approach in relation to classical
microbiology. The investigators believe that studying the respiratory flora of ventilated
patients could provide clues to better understand the development of VAP.
METHODOLOGY (plan, inclusion and objectives):
Prospective study of 300 intubated patients recruited during a period of 2 years, in whom
tracheal aspirates and oropharyngeal juice collected daily will be analyzed by culture and
metagenomics, instead of being simply discarded. The results of these analyzes will be used
only for research purposes (culture and metagenomics in parallel).
The main objective is to determine whether daily monitoring of oropharyngeal juice and
tracheal aspirates by culture identifies the selection of a pathogen among the colonizing
flora, which would be predictive of the onset of VAP in 48-72 hours.
The secondary objectives are to obtain new knowledge on the kinetics of colonization and
respiratory infections in intubated patients, compare the advantages and disadvantages of a
metagenomic approach compared to culture in this context, and study the influence of
antibiotherapy in this context.
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Observational Model: Cohort, Time Perspective: Prospective
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