Antibiotic Resistance Clinical Trial
— ARIESOfficial title:
Antibiotic Resistance In Eye Surgeries (ARIES)
In this study, the investigators seek to determine the effect of antibiotic use post-surgery on antimicrobial resistance. The investigators will be studying adults (aged 18 or older) who will undergo eye surgery at University of California, San Francisco (UCSF). We seek to gain a better understanding of how antibiotic use during the perioperative period influences local and systemic antibiotic resistance at the individual level.
Status | Recruiting |
Enrollment | 108 |
Est. completion date | December 2023 |
Est. primary completion date | December 2023 |
Accepts healthy volunteers | No |
Gender | All |
Age group | 18 Years to 85 Years |
Eligibility | Inclusion Criteria: 1. Over 18 years of age 2. Undergoing cataract surgeries that would benefit from intracameral antibiotics 3. Able to provide swabs 4. Able to provide consent 5. Surgery of the second eye occurs at least 8 weeks after surgery of the first eye Exclusion Criteria: 1. Same-day bilateral cataract surgeries 2. On immunosuppression medication such as Prednisone, Methotrexate, Cellcept, or anti-TNF inhibitors within past 3 months 3. On systemic antibiotic within past 3 months 4. On topical antibiotics within past 8 weeks 5. Allergies to fluoroquinolone 6. Patients needing glaucoma drainage device or trabeculectomy 7. Inability to consent |
Country | Name | City | State |
---|---|---|---|
United States | University of California, San Francisco | San Francisco | California |
Lead Sponsor | Collaborator |
---|---|
University of California, San Francisco |
United States,
Gaynor BD, Chidambaram JD, Cevallos V, Miao Y, Miller K, Jha HC, Bhatta RC, Chaudhary JS, Osaki Holm S, Whitcher JP, Holbrook KA, Fry AM, Lietman TM. Topical ocular antibiotics induce bacterial resistance at extraocular sites. Br J Ophthalmol. 2005 Sep;89(9):1097-9. — View Citation
Type | Measure | Description | Time frame | Safety issue |
---|---|---|---|---|
Primary | Antimicrobial Resistance (AMR) of Conjunctiva at 1 week | Normalized read counts (reads per million reads or rM) for fluoroquinolone resistance determinants from DNA deep sequencing for the conjunctival swabs at 1 week. | 1 Week | |
Primary | Antimicrobial Resistance (AMR) of Nasopharynx at 1 week | Normalized read counts (reads per million reads or rM) for fluoroquinolone resistance determinants from DNA deep sequencing for the nasopharyngeal swabs at 1 week. | 1 week | |
Primary | Antimicrobial Resistance (AMR) of Oral at 1 week | Normalized read counts (reads per million reads or rM) for fluoroquinolone resistance determinants for the buccal swabs at 1 week. | 1 week | |
Primary | Antimicrobial Resistance (AMR) of Gut at 1 Week | Normalized reads counts (reads per million reads or rM) for fluoroquinolone resistance determinants for the rectal swabs at 1 week. | 1 week | |
Secondary | Ocular Surface Microbiome with Shannon's diversity index at 1 week | Shannon's diversity index (H) will be measured to calculate species richness of ocular surface microbiome at 1 week. Shannon's diversity index (H) is calculated through the following formula, H = -sum(pi*log(b)*pi), where pi is the proportional abundance of species and b is the base of the logarithm. | 1 week | |
Secondary | Ocular Surface Microbiome with Simpson's diversity index at 1 week | Simpson's diversity index (D) will be measured to calculate species richness of ocular surface microbiome at 1 week. Simpson's diversity index (D) is calculated through the following formula, D = sum(pi^2), where pi is the proportional abundance of species. | 1 week | |
Secondary | Ocular Surface Microbiome with Shannon's diversity index at 1 month | Shannon's diversity index (H) will be measured to calculate species richness of ocular surface microbiome at 1 month. Shannon's diversity index (H) is calculated through the following formula, H = -sum(pi*log(b)*pi), where pi is the proportional abundance of species and b is the base of the logarithm. | 1 month | |
Secondary | Ocular Surface Microbiome with Simpson's diversity index at 1 month | Simpson's diversity index (D) will be measured to calculate species richness of ocular surface microbiome at 1 month. Simpson's diversity index (D) is calculated through the following formula, D = sum(pi^2), where pi is the proportional abundance of species. | 1 month | |
Secondary | Nasopharyngeal Microbiome with Shannon's diversity index at 1 week | Shannon's diversity index (H) will be measured to calculate species richness of nasopharyngeal microbiome at 1 week. Shannon's diversity index (H) is calculated through the following formula, H = -sum(pi*log(b)*pi), where pi is the proportional abundance of species and b is the base of the logarithm. | 1 week | |
Secondary | Nasopharyngeal Microbiome with Simpson's diversity index at 1 week | Simpson's diversity index (D) will be measured to calculate species richness of nasopharyngeal microbiome at 1 week. Simpson's diversity index (D) is calculated through the following formula, D = sum(pi^2), where pi is the proportional abundance of species. | 1 week | |
Secondary | Nasopharyngeal Microbiome with Shannon's diversity index at 1 month | Shannon's diversity index (H) will be measured to calculate species richness of nasopharyngeal microbiome at 1 month. Shannon's diversity index (H) is calculated through the following formula, H = -sum(pi*log(b)*pi), where pi is the proportional abundance of species and b is the base of the logarithm. | 1 month | |
Secondary | Nasopharyngeal Microbiome with Simpson's diversity index at 1 month | Simpson's diversity index (D) will be measured to calculate species richness of nasopharyngeal microbiome at 1 month. Simpson's diversity index (D) is calculated through the following formula, D = sum(pi^2), where pi is the proportional abundance of species. | 1 month | |
Secondary | Gut Microbiome with Shannon's diversity index at 1 week | Shannon's diversity index (H) will be measured to calculate species richness of gut microbiome at 1 week. Shannon's diversity index (H) is calculated through the following formula, H = -sum(pi*log(b)*pi), where pi is the proportional abundance of species and b is the base of the logarithm. | 1 week | |
Secondary | Gut Microbiome with Simpson's diversity index at 1 week | Simpson's diversity index (D) will be measured to calculate species richness of gut microbiome at 1 week. Simpson's diversity index (D) is calculated through the following formula, D = sum(pi^2), where pi is the proportional abundance of species. | 1 week | |
Secondary | Oral Microbiome with Shannon's diversity index at 1 Week | Shannon's diversity index (H) will be measured to calculate species richness of oral microbiome at 1 week. Shannon's diversity index (H) is calculated through the following formula, H = -sum(pi*log(b)*pi), where pi is the proportional abundance of species and b is the base of the logarithm. | 1 week | |
Secondary | Oral Microbiome with Simpson's diversity index at 1 Week | Simpson's diversity index (D) will be measured to calculate species richness of oral microbiome at 1 week. Simpson's diversity index (D) is calculated through the following formula, D = sum(pi^2), where pi is the proportional abundance of species. | 1 week | |
Secondary | Oral Microbiome with Shannon's diversity index at 1 Month | Shannon's diversity index (H) will be measured to calculate species richness of oral microbiome at 1 month. Shannon's diversity index (H) is calculated through the following formula, H = -sum(pi*log(b)*pi), where pi is the proportional abundance of species and b is the base of the logarithm. | 1 month | |
Secondary | Oral Microbiome with Simpson's diversity index at 1 Month | Simpson's diversity index (D) will be measured to calculate species richness of oral microbiome at 1 month. Simpson's diversity index (D) is calculated through the following formula, D = sum(pi^2), where pi is the proportional abundance of species. | 1 month |
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